Clinical AI Models Catalog

Discover verified open-source medical AI models for radiology, pathology, clinical NLP, and genomic variant classification with live GitHub telemetry.

Model General Clinical Practice

3Dmol.Js

3Dmol.Js is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: WebGL accelerated JavaScript molecular graphics library Primary Domain: General...

Intended Use Cases:
Not specified.
Model Clinical Text

500-AI-Agent-Projects

The 500 AI Agents Projects is a curated collection of AI agent use cases across various industries. It showcases practical applications and provides links to...

Intended Use Cases:
Not specified.
Model Clinical Text

AI-HealthCare-Assistant

🏥 AI-powered healthcare web app Symptom detection · Nearest doctor search · Blockchain medical records · X-Ray diagnosis · Face ID auth Built with React,...

Intended Use Cases:
Not specified.
Model Clinical Text

AI-Healthcare-Chatbot

AI Healthcare Chatbot – An AI-powered chatbot for answering medical queries and providing health insights. solving core medical data engineering challenges. It processes clinical data...

Intended Use Cases:
Not specified.
Model Infrastructure

AIML-in-Medicine-club

Repository for “AI/MD in Medicine” club in clubhouse solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures....

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Ai For Medicine

Ai For Medicine is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: This repository is a summary of...

Intended Use Cases:
Not specified.
Model Genomics / Proteomics

AlphaMissense

AlphaMissense is an AI model developed by Google DeepMind that predicts the pathogenicity of all possible 71 million human missense variants (where a single letter...

Intended Use Cases:
Not specified.
Model Clinical Text

Audio-Health-Assistant

🕍 Audio 🕌 Health 🏰 Assistant 🏨 is an 🚂 innovative 🚋 AI 🚘 powered 🚒 healthcare 🚃 assistant 🚁 that ⛴ uses 🚟 speech...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Autoregressive Models In Vision Survey

Autoregressive Models In Vision Survey is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [TMLR 2025🔥] A survey...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Awesome Bioinformatics

Awesome Bioinformatics is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: A curated list of awesome Bioinformatics libraries and...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Awesome Computational Neuroscience

Awesome Computational Neuroscience is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: A list of schools and researchers in...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Awesome Diffusion Models In Medical Imaging

Awesome Diffusion Models In Medical Imaging is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Diffusion Models in...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Awesome Gan For Medical Imaging

Awesome Gan For Medical Imaging is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Awesome GAN for Medical...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

Awesome Medical Llm Agent

Awesome Medical Llm Agent is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: Reasoning as the Engine: The...

Intended Use Cases:
Not specified.
Model Text / Language

BioBERT

BioBERT (Biomedical language representation model designed for biomedical text mining) is a domain-specific language representation model pre-trained on large-scale biomedical corpora (PubMed abstracts and PMC...

Intended Use Cases:
Biomedical text mining tasks such as named entity recognition (NER), relation extraction (RE), and question answering (QA).
Model Text / NLP

BioGPT

BioGPT is a domain-specific generative transformer language model pre-trained on large-scale biomedical literature, developed by Microsoft Research. Key Capabilities Biomedical Literature Pre-training: Pre-trained exclusively on...

Intended Use Cases:
Not specified.
Model Text / NLP

BioMed-RoBERTa

BioMed-RoBERTa is a foundational NLP model adapted from RoBERTa-base and pre-trained exclusively on biomedical literature. Developed by the Allen Institute for AI (AI2), it is...

Intended Use Cases:
Biomedical text mining, named entity recognition (NER), relation extraction, and literature semantic search.
Model LLM

BioMistral

BioMistral is a collection of open-source Large Language Models (LLMs) specifically tailored for the biomedical domain. It is built upon the Mistral 7B foundation model...

Intended Use Cases:
Not specified.
Model Biomolecular

BioNeMo

NVIDIA BioNeMo is a cloud API service and framework for training and deploying foundation models for generative biology and chemistry. Key Capabilities Multi-Modal Generation: BioNeMo...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Bioconda Recipes

Bioconda Recipes is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: Conda recipes for the bioconda channel. Primary Domain:...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Biopandas

Biopandas is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Working with molecular structures in pandas DataFrames Primary...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Biopython

Biopython is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Official git repository for Biopython (originally converted from...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

Bioreason

Bioreason is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Biotite

Biotite is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: A comprehensive library for computational molecular biology Primary...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Bwa

Bwa is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read...

Intended Use Cases:
Not specified.
Model Imaging / X-Ray

CheXNet

CheXNet is a dense convolutional neural network (DenseNet) trained to detect pneumonia and 13 other chest diseases from frontal-view chest X-ray images, originally developed by...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Clair3

Clair3 is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Clair3 - Symphonizing pileup and full-alignment for deep...

Intended Use Cases:
Not specified.
Model LLM

Clinical LLaMA 3

Clinical LLaMA 3 is an open-weights Large Language Model built upon the powerful LLaMA 3 architecture, specifically quantized and fine-tuned for structured information extraction from...

Intended Use Cases:
Medical billing automation, ICD-10 extraction, unstructured clinical note summarization.
Model Text / Language

Clinical T5

Clinical T5 is a transformer model based on the T5 architecture that has been continually pre-trained on a vast corpus of clinical text, including MIMIC-III...

Intended Use Cases:
Summarization of clinical notes, extracting medical entities, and medical text generation.
Model Natural Language Processing

ClinicalBERT

ClinicalBERT is a pre-trained contextualized language model built upon the BERT architecture, specifically fine-tuned on the large-scale MIMIC-III clinical database. Key Capabilities Clinical Language Understanding:...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Cobrapy

Cobrapy is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: COBRApy is a package for constraint-based modeling of metabolic...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Colabfold

Colabfold is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Making Protein folding accessible to all! Primary Domain:...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Cornerstone

Cornerstone is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/ Primary Domain: General...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Craftgrn

Craftgrn is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Combined RNA and ATAC Footprint Training of Gene...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Cs Video Courses

Cs Video Courses is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: List of Computer Science courses with...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Cura

Cura is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: actAVA Cura: Specialized Model for Agentic Healthcare Primary...

Intended Use Cases:
Not specified.
Multi-Modal / Clinical Decision Support

CytoMap-Leukemia

CytoMap-Leukemia: CytoMap-Leukemia: Offline Clinical Clinical Hematology Foundation Engine for High-Dimensional Flow Cytometry Automated Gating & MRD Quantification AI CytoMap-Leukemia is an open-source clinical AI foundation...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Dance

Dance is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: DANCE: a deep learning library and benchmark platform for...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Dash

Dash is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Data Apps & Dashboards for Python. No JavaScript...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Dash Cytoscape

Dash Cytoscape is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Interactive network visualization in Python and Dash,...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Deep Gcns Torch

Deep Gcns Torch is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: Pytorch Repo for DeepGCNs (ICCV’2019 Oral, TPAMI’2021),...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Deep Learning Drizzle

Deep Learning Drizzle is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Drench yourself in Deep Learning, Reinforcement...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Deep Learning For Medical Applications

Deep Learning For Medical Applications is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Deep Learning Papers on...

Intended Use Cases:
Not specified.
Model Proteomics / Sequence

DeepLoc

DeepLoc is a deep neural network-based tool designed to predict the subcellular localization of proteins based solely on their amino acid sequences. Key Capabilities Multi-Class...

Intended Use Cases:
Not specified.
Model Genomics

DeepVariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. Key Capabilities High Accuracy Variant...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

Deeplearing Interview Awesome 2024

Deeplearing Interview Awesome 2024 is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓,同时包含工作和科研过程中的新想法、新问题、新资源与新项目 Primary Domain: General Clinical...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Doctobert

Doctobert is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: A medical encoder, pretrained from scratch on curated...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Dwv

Dwv is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: DICOM Web Viewer: open source zero footprint medical...

Intended Use Cases:
Not specified.
Time-Series / Longitudinal EHR

EHR-Dino-Clinical

EHR-Dino-Clinical: Self-Supervised Patient Trajectory & Sepsis Prediction EHR-Dino-Clinical is an open-source clinical AI foundation model engineered for Critical Care / Emergency Medicine and Time-Series /...

Intended Use Cases:
Not specified.
Model Synthetic Data Generation

EHR-Safe

EHR-Safe is a generative modeling framework developed by Google Research that synthesizes highly realistic, privacy-preserving electronic health record (EHR) data. Key Capabilities Dual-Modality Generation: Capable...

Intended Use Cases:
Not specified.
Cardiovascular Ultrasound / Video

EchoCLIP-Cardiac

EchoCLIP-Cardiac: EchoCLIP: Multi-Modal Contrastive Vision-Language Pre-Training for Automated Echocardiography & Valve Quantification EchoCLIP-Cardiac is an open-source clinical AI foundation model engineered for Cardiovascular Medicine and...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Factorizephys

Factorizephys is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: FactorizePhys: Matrix Factorization for Multidimensional Attention in Remote...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Fastp

Fastp is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging…) Primary Domain: Oncology...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Fo Dicom

Fo Dicom is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Fellow Oak DICOM for .NET, .NET Core,...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Foldseek

Foldseek is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Foldseek enables fast and sensitive comparisons of large...

Intended Use Cases:
Not specified.
Model Natural Language Processing

GatorTron

GatorTron is an open-source large language model (LLM) developed specifically for the healthcare domain, trained on over 90 billion words of clinical text, including millions...

Intended Use Cases:
Not specified.
Model Text

Gemma 2 9B IT

Gemma 2 is a state-of-the-art open language model from Google, built from the same research and technology used to create the Gemini models. The 9B...

Intended Use Cases:
Clinical text summarization, question answering, and entity extraction.
Genomic Sequence / RNA-Seq

GenomeTransformer-Splice

GenomeTransformer-Splice: GenomeTransformer: Deep Generative Modeling of Non-Coding Variant Splicing & Pathogenicity Across 100,000 Rare Diseases GenomeTransformer-Splice is an open-source clinical AI foundation model engineered for...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Geodiff

Geodiff is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Implementation of GeoDiff: a Geometric Diffusion Model for Molecular...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

Glycemicgpt

Glycemicgpt is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: Because no one should manage diabetes alone 💙...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Graphein

Graphein is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Protein Graph Library Primary Domain: Radiology / Pathology...

Intended Use Cases:
Not specified.
Model Clinical Text

HealthChain

Python SDK for healthcare AI: connect models to live EHR systems, skip the integration tax 💫 🏥 solving core medical data engineering challenges. It processes...

Intended Use Cases:
Not specified.
Model Clinical Text

Healthcare-AI-Voice-agent

A comprehensive full-stack healthcare application that leverages AI-powered voice interactions for patient triage, symptom analysis, specialist mapping, and appointment booking. It is built with modern...

Intended Use Cases:
Not specified.
Model Infrastructure

Healthcare-Agent

A comprehensive healthcare management system that provides a REST API for accessing ICU patient data and medical appointments. The system leverages AWS Bedrock for AI-powered...

Intended Use Cases:
Not specified.
Model Clinical Text

Healthcare-voice-agent

A comprehensive full-stack healthcare application that leverages AI-powered voice interactions for patient triage, symptom analysis, specialist mapping, and appointment booking. Built with modern technologies including...

Intended Use Cases:
Not specified.
Model Clinical Text

Hicare

HiCare is a comprehensive personalized healthcare solution that harnesses the power of microservices, patient data, genomics, and artificial intelligence (AI) to revolutionize the way healthcare...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Hms Harmful Brain Activity Classification

Hms Harmful Brain Activity Classification is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Kaggle Silver Medal solution...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Intelliscope

Intelliscope is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Frontiers in Intelligent Colonoscopy [ColonSurvey ColonINST ColonGPT] Primary...

Intended Use Cases:
Not specified.
Model Infrastructure

JanSevak

JanSevak is a AI powered HealthCare Management System. The system allows users to register as patients, book appointments, and predict diseases based on symptoms. Doctors...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Jupyter Dock

Jupyter Dock is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Jupyter Dock is a set of Jupyter...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

K Dense Byok

K Dense Byok is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: An AI co-scientist running on your...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Kare

Kare is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [ICLR’25] Reasoning-Enhanced Healthcare Predictions with Knowledge Graph Community...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Kent

Kent is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: UCSC Genome Browser source. “beta” is released version /...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Labsus

Labsus is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: Laboratório de Inteligência em Saúde Pública Primary Domain: General...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Learning Deep Learning

Learning Deep Learning is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Paper reading notes on Deep Learning...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Lia Assistant

Lia Assistant is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Smart multi-agent conversational assistant with LangGraph orchestration,...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Mambaliteunet

Mambaliteunet is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: CVPR 2026 (Main) MambaLiteUNet: Cross-Gated Adaptive Feature Fusion...

Intended Use Cases:
Not specified.
Model Natural Language Processing

Med-PaLM 2

Med-PaLM 2 is Google’s state-of-the-art large language model designed specifically for the medical domain. It is an evolution of the PaLM 2 architecture, explicitly tuned...

Intended Use Cases:
Not specified.
Model NLP / Large Language Model

MedAlpaca

MedAlpaca is a suite of large language models specifically fine-tuned for the medical domain. It is built upon the Llama architecture and trained using over...

Intended Use Cases:
Medical question answering, clinical note summarization, and interactive medical dialogue.
Text, 2D/3D Imaging (CT/MRI/CXR), Longitudinal EHR

MedGemma-27B

MedGemma-27B: MedGemma: Open-Weight Multimodal Clinical Foundation Model for 2D/3D Medical Imaging & Longitudinal EHR MedGemma-27B is an open-source clinical AI foundation model engineered for Radiology,...

Intended Use Cases:
Not specified.
Model Clinical Text

MedGuard

MedGuard is a robust, production-grade Python library that ensures HIPAA compliance for large language model (LLM) agents. Designed for enterprise applications in healthcare, MedGuard provides...

Intended Use Cases:
Not specified.
Model Radiology / Pathology / Endoscopy

MedSAM

MedSAM is a foundational model for medical image segmentation, fine-tuned from Meta’s Segment Anything Model (SAM) on an unprecedentedly large dataset of over 1.5 million...

Intended Use Cases:
Universal image segmentation model capable of segmenting a wide variety of medical objects across different imaging modalities with bounding box prompts.
Model Imaging / Computer Vision

MedSAM

MedSAM (Medical Segment Anything Model) is a foundation model for medical image segmentation, developed by the Bo Wang Lab and adapted from Meta’s Segment Anything...

Intended Use Cases:
Not specified.
Model Radiology / Computer Vision

MedViT

MedViT is an advanced hybrid Vision Transformer designed specifically for medical image classification. It tackles the challenge of high computational complexity in standard ViTs by...

Intended Use Cases:
Robust medical image classification, feature extraction for downstream diagnostic tasks.
Model Clinical Text

MediGenius

Advanced multi-agent Medical AI Assistant powered by LangGraph that delivers empathetic, doctor-like responses using a hybrid pipeline of LLM reasoning, RAG from medical PDFs, and...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Medical Research Skills

Medical Research Skills is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Hundreds of agent skills for medical research,...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Medical Sam Adapter

Medical Sam Adapter is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: A lightweight adapter bridges SAM with medical...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Medicalzoopytorch

Medicalzoopytorch is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: A pytorch-based deep learning framework for multi-modal 2D/3D...

Intended Use Cases:
Not specified.
Model Text / NLP

Meditron

Meditron is an open-source suite of large language models (7B and 70B parameters) specifically tailored for the medical domain. Developed by EPFL, Meditron is adapted...

Intended Use Cases:
Clinical reasoning, medical QA, and diagnostic decision support.
Model Clinical NLP / LLM

Medmemorybench

Medmemorybench is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: The source code and data link of paper...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Mednext

Mednext is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Medrax

Medrax is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: MedRAX: Medical Reasoning Agent for Chest X-ray -...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Medresearcher R1

Medresearcher R1 is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: MedResearcher-R1 is a deep research agent for...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Medsegdiff

Medsegdiff is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Using Diffusion Models to Segment/Reconstruct Organs from Medical...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Medsegx Code

Medsegx Code is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [nature biomedical engineering 2025] Official code for...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Metaphys

Metaphys is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: MetaPhys: Few-Shot Adaptation for Non-Contact Physiological Measurement (ACM...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Miccai Opensourcepapers

Miccai Opensourcepapers is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: MICCAI 2019-2023 Open Source Papers Primary Domain: General...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Minimap2

Minimap2 is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: A versatile pairwise aligner for genomic and spliced nucleotide...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

Mllmcelltype

Mllmcelltype is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: Cell type annotation for single-cell RNA-seq using multi-LLM...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Mmseqs2

Mmseqs2 is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: MMseqs2: ultra fast and sensitive search and clustering suite...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Multiqc

Multiqc is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Aggregate results from bioinformatics analyses across many samples into...

Intended Use Cases:
Not specified.
Structural & Diffusion MRI (dMRI)

NeuroSurg-Seg3D

NeuroSurg-Seg3D: NeuroSurg-3D: Sub-Millimeter Diffusion-Guided Cranial Nerve & Glioma Tractography for Intraoperative Surgical Guidance NeuroSurg-Seg3D is an open-source clinical AI foundation model engineered for Neurosurgery /...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Niftynet

Niftynet is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [unmaintained] An open-source convolutional neural networks platform for...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Nitrain

Nitrain is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Train AI models efficiently on medical images using...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Omicverse

Omicverse is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: A python library for multi omics included bulk, single...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Open Computational Neuroscience Resources

Open Computational Neuroscience Resources is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: A publicly-editable collection of open...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Open Science

Open Science is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Open Science by AIPOCH is an open-source,...

Intended Use Cases:
Not specified.
Model 3D Structure Prediction

OpenFold

OpenFold is a highly optimized, open-source PyTorch reproduction of DeepMind’s AlphaFold 2. It is designed to be fully trainable and fine-tunable, providing researchers with the...

Intended Use Cases:
Not specified.
Model Clinical NLP / LLM

Openlens Ai

Openlens Ai is an open-source model in the Clinical NLP / LLM domain. Overview & Key Features Description: OpenLens AI: A Fully Autonomous Multimodal Research...

Intended Use Cases:
Not specified.
Model General Clinical Practice

Opensim Core

Opensim Core is an open-source model in the General Clinical Practice domain. Overview & Key Features Description: SimTK OpenSim C++ libraries and command-line applications, and...

Intended Use Cases:
Not specified.
Model Clinical Text

PICO_Parser

A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework solving core medical data engineering challenges. It processes clinical data inputs...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Panecho

Panecho is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [JAMA] “Complete AI-Enabled Echocardiography Interpretation with Multitask Deep...

Intended Use Cases:
Not specified.
Digital Pathology / Histology WSI

PathoFoundation-WSI

PathoFoundation-WSI: PathoFoundation: Gigapixel Whole-Slide Pathology AI Eliminating Diagnostic Inter-Observer Variability in Oncology PathoFoundation-WSI is an open-source clinical AI foundation model engineered for Oncology / Surgical...

Intended Use Cases:
Not specified.
Multi-Modal / Clinical Decision Support

PedsCardio-EchoFlow

PedsCardio-EchoFlow: PedsCardio-EchoFlow: Offline Clinical Pediatric Cardiology Foundation Engine for Congenital Heart Disease Echocardiography Doppler AI PedsCardio-EchoFlow is an open-source clinical AI foundation model engineered for...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Pertpy

Pertpy is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Single-cell perturbation analysis Primary Domain: General Clinical Practice (Genomics...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Poly

Poly is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: A Go package for engineering organisms. Primary Domain: General...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Proteingym

Proteingym is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Official repository for the ProteinGym benchmarks Primary Domain: General...

Intended Use Cases:
Not specified.
Gigapixel Digital Pathology (WSI)

Prov-GigaPath

Prov-GigaPath: Prov-GigaPath: Whole-Slide Pathology Foundation Model Pre-Trained on 1.3 Billion Parameters from Real-World Biopsies Prov-GigaPath is an open-source clinical AI foundation model engineered for Oncology...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Pyradiomics

Pyradiomics is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Open-source python package for the extraction of Radiomics...

Intended Use Cases:
Not specified.
Multi-Modal / Clinical Decision Support

RenalGraft-VXM

RenalGraft-VXM: RenalGraft-VXM: Offline Clinical Transplant Nephrology Foundation Engine for Renal Allograft Rejection & Single-Cell Transcriptomic Biomarker Engine RenalGraft-VXM is an open-source clinical AI foundation model...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Scanpy

Scanpy is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Single-cell analysis in Python. Scales to >100M cells. Primary...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Sciagent Skills

Sciagent Skills is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: 197 bioinformatics & life science skills for Claude...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Scikit Bio

Scikit Bio is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: scikit-bio: a community-driven Python library for bioinformatics,...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Seq

Seq is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: A high-performance, Pythonic language for bioinformatics Primary Domain: General...

Intended Use Cases:
Not specified.
Model Clinical Text

Starmoon

A conversational, AI device + software framework for companionship, entertainment, education, healthcare, IoT applications, and DIY robotics. Built with Python, NextJS, Arduino, ESP32, LLMs (GPT-4o),...

Intended Use Cases:
Not specified.
Multi-Modal / Clinical Decision Support

StrokeDense-CTA

StrokeDense-CTA: StrokeDense-CTA: Offline Clinical Emergency Neuro-Radiology Foundation Engine for Multi-Phase CT Angiography Large Vessel Occlusion & Collateral Scoring AI StrokeDense-CTA is an open-source clinical AI...

Intended Use Cases:
Not specified.
Model Genomics / Bioinformatics

Tangram

Tangram is an open-source model in the Genomics / Bioinformatics domain. Overview & Key Features Description: Spatial alignment of single cell transcriptomic data. Primary Domain:...

Intended Use Cases:
Not specified.
Biomedical Knowledge Graphs & Molecular Networks

TxGNN

TxGNN: TxGNN: Foundation Model for Clinician-Centered Zero-Shot Drug Repurposing Across 17,000 Rare Diseases TxGNN is an open-source clinical AI foundation model engineered for Multi-System Rare...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Ultrabot

Ultrabot is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [Nature Communications 2025] Towards Expert-level Autonomous Carotid Ultrasonography...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Unetplusplus

Unetplusplus is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: [IEEE TMI Best Paper Award] Official Implementation for...

Intended Use Cases:
Not specified.
Clinical Images, Biosignals & Medical Text

UniMedVL

UniMedVL: UniMedVL: Unified Multimodal Foundation Model for Cross-Modal Clinical Understanding & Diagnostic Reasoning UniMedVL is an open-source clinical AI foundation model engineered for Diagnostic Radiology...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Weasis

Weasis is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Weasis is a web-based DICOM viewer for advanced...

Intended Use Cases:
Not specified.
Model Medical Imaging

WellAlly-health

Ally-Health is an intelligent healthcare assistant that combines Claude AI technology with medical expertise. Through natural language interaction, it helps users record symptoms, manage medications,...

Intended Use Cases:
Not specified.
Model Imaging / Computer Vision

Xai Thyroid

Xai Thyroid is an open-source model in the Imaging / Computer Vision domain. Overview & Key Features Description: Classification and Object Detection XAI methods (CAM-based,...

Intended Use Cases:
Not specified.
Model Clinical Text

a-proof-zonmw

Detecting the functioning level of a patient from a free-text clinical note in Dutch. solving core medical data engineering challenges. It processes clinical data inputs...

Intended Use Cases:
Not specified.
Model Clinical Text

ai-voice-agent

A comprehensive full-stack healthcare application that leverages AI-powered voice interactions for patient triage, symptom analysis, specialist mapping, and appointment booking. It is built with modern...

Intended Use Cases:
Not specified.
Model Medical Imaging

akello

Healthcare OS for interoperability and AI-driven data processing solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures....

Intended Use Cases:
Not specified.
Model Clinical Text

aws-healthcare-lifescience-ai-ml-sample-notebooks

An open-source healthcare AI repository. solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures. Developers can implement...

Intended Use Cases:
Not specified.
Model Clinical Text

bio

The world’s most powerful open-source bio AI assistant - Access academic literature, clinical trials, drug labels, and more, all through natural conversation. solving core medical...

Intended Use Cases:
Not specified.
Model Clinical Text

claude-code-local

Run Claude Code 100% on-device with local AI on Apple Silicon. MLX-native Anthropic-API server, 65 tok/s Qwen 3.5 122B, Llama 3.3 70B, Gemma 4 31B....

Intended Use Cases:
Not specified.
Model Clinical Text

cognitive-companion

A privacy-first, on-premise AI system for senior care in multigenerational households. solving core medical data engineering challenges. It processes clinical data inputs natively through its...

Intended Use Cases:
Not specified.
Model Clinical Text

edsnlp

Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes. solving core medical data engineering challenges. It processes clinical...

Intended Use Cases:
Not specified.
Model Medical Imaging

healthcare-mcp-public

A Model Context Protocol (MCP) server providing AI assistants with access to healthcare data and medical information tools, including FDA drug info, PubMed, medRxiv, NCBI...

Intended Use Cases:
Not specified.
Model Clinical Text

medflow

Qingnang Smart Diagnosis is an end-to-end AI healthcare framework with field-proven application capabilities, designed to provide efficient and intelligent solutions for the medical industry. solving...

Intended Use Cases:
Not specified.
Model Infrastructure

medic-ai

AI Toolkit for Healthcare Imaging in Keras 3 solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures....

Intended Use Cases:
Not specified.
Model Clinical Text

medoraAI

Medora AI is an innovative, voice-first medical appointment booking system designed to revolutionize healthcare scheduling through conversational artificial intelligence solving core medical data engineering challenges....

Intended Use Cases:
Not specified.
Model Clinical Text

medplum-ai-concierge

Healthcare dashboard with AI-powered chart generation solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures. Developers can...

Intended Use Cases:
Not specified.
Model Clinical Text

medspacy

Library for clinical NLP with spaCy. solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures. Developers can...

Intended Use Cases:
Not specified.
Model Clinical Text

multimodal_fairness

Code for “Exploring Text Specific and Blackbox Fairness Algorithms in Multimodal Clinical NLP” solving core medical data engineering challenges. It processes clinical data inputs natively...

Intended Use Cases:
Not specified.
Model Clinical Text

multitasking_transformers

Multitask Learning with Pretrained Transformers solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures. Developers can implement...

Intended Use Cases:
Not specified.
Model Infrastructure

open-wearables

Self-hosted platform to unify wearable health data through one AI-ready API. solving core medical data engineering challenges. It processes clinical data inputs natively through its...

Intended Use Cases:
Not specified.
Model Clinical Text

openevidence-mcp

OpenEvidence MCP: open-source browser-session MCP server for human and AI-agent medical workflows solving core medical data engineering challenges. It processes clinical data inputs natively through...

Intended Use Cases:
Not specified.
Model Clinical Text

openmed-agent

AI-powered medical assistant for the terminal — private, sandboxed, and built for clinical workflows solving core medical data engineering challenges. It processes clinical data inputs...

Intended Use Cases:
Not specified.
Model Clinical Text

preclinical

Preclinical is an open-source healthcare AI safety testing platform. It simulates realistic adversarial patient interactions against your agent, stores transcripts, and grades outcomes against safety...

Intended Use Cases:
Not specified.
Model Clinical Text

prompts-for-health

Helpful prompts to transform the way healthcare professionals use generative conversational AI. solving core medical data engineering challenges. It processes clinical data inputs natively through...

Intended Use Cases:
Not specified.
Model Clinical Text

sectionizer

A rule-based Python module for spitting documents into sections. solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository...

Intended Use Cases:
Not specified.
Model Infrastructure

seismometer

AI model evaluation with a focus on healthcare solving core medical data engineering challenges. It processes clinical data inputs natively through its core repository architectures....

Intended Use Cases:
Not specified.
Model Clinical Text

stenoai

Steno is the AI powered intelligence layer for all your confidential conversations. Capture beautiful notes whilst keeping your data confidential. Perfect for government, defence, legal...

Intended Use Cases:
Not specified.
Model Clinical Text

system-prompts-and-models-of-ai-tools

A comprehensive collection of AI system prompts, tools, and implementations across various domains including healthcare, voice AI, mental health, and development tools. Features curated resources...

Intended Use Cases:
Not specified.